浙江大学医学院公共技术平台,杭州 310058
浙江大学仪器研制培育专项(YQZX-C202412)和浙江省基础公益研究计划(LGC19H090001)资助。
Core Facilities, Zhejiang University School of Medicine, Hangzhou 310058, China
This work was supported by grants from the Zhejiang University Instrument Development and Cultivation Program (YQZX-C202412) and the Zhejiang Province Basic Public Welfare Program (LGC19H090001) .
光学显微镜作为探索微观世界的核心工具,其分辨率直接决定了解析生物及材料精细结构的能力。随着超分辨荧光显微技术的突破性发展,传统基于衍射极限的经验判据(如瑞利准则)和点扩散函数宽度法等分辨率检测手段已无法满足对纳米尺度成像质量的客观量化需求。本文系统梳理了光学显微成像分辨率检测方法从传统经验判据到超分辨技术适配方案的完整演进脉络。首先,回顾了基于傅里叶变换的定量方法,包括傅里叶环相关及其三维扩展形式傅里叶壳层相关,它们通过分析独立图像在频域的相关性,为电子显微镜和超分辨成像提供了客观、抗噪的全局分辨率标准。进而,重点阐述了针对不同超分辨成像机理的专属优化策略:面向单分子定位显微镜的傅里叶图像分辨率(FIRE)方法,综合了定位精度与标记密度对最终图像分辨率的共同制约;针对受激发射损耗(STED)等非线性调制显微镜,则发展了基于点扩散函数(PSF)压缩测量及生物样本线宽分析的有效分辨率评估手段。特别值得关注的是,近年来兴起的基于去相关分析的无参数方法,通过解析单幅图像的频谱自相关衰减,实现了无需人工设定阈值、无需成对图像的客观分辨率评估,在多模态超分辨成像中展现出卓越的普适性与效率。此外,本文还探讨了基于已知纳米结构(如DNA折纸术)的直接验证“金标准”,以及深度学习在图像重建质量评估与伪影识别中的新挑战与应用潜力。最后,文章展望了未来分辨率检测技术向跨模态统一标准、实时动态监测、局部分辨率图谱绘制及人工智能增强的智能校正等方向的发展趋势。本综述旨在为超分辨光学显微成像技术的精准量化提供系统的理论支撑与实践指南,推动其在生物医学及材料科学中的广泛应用。
Optical microscopy is essential for exploring biological and material structures, with resolution determining the level of observable detail. The advent of super-resolution fluorescence microscopy has broken the diffraction limit, achieving nanoscale resolution. However, traditional assessment methods, such as the Rayleigh criterion and point spread function (PSF) width measurement, rely on empirical judgments and diffraction-limited models, rendering them inadequate for modern super-resolution imaging. This review systematically traces the evolution of resolution assessment methodologies, from classical criteria to advanced strategies tailored for various super-resolution modalities. We first discuss Fourier-based quantitative methods. Fourier ring correlation (FRC) and its 3D counterpart, Fourier shell correlation (FSC), objectively determine resolution by evaluating the statistical correlation of two independent image reconstructions in frequency space. These methods offer robustness against noise and provide a global resolution metric, but they require data independence and are computationally intensive. They have become the prevailing standards in electron and super-resolution microscopy. Subsequently, we examine adaptations for specific super-resolution techniques. For single-molecule localization microscopy (SMLM) techniques such as PALM and STORM, the Fourier image resolution (FIRE) method extends FRC by incorporating a physical model that accounts for localization precision and labeling density. For stimulated emission depletion (STED) microscopy and other nonlinear techniques, assessment strategies differ. While PSF shrinkage measurements using fluorescent beads are useful for system calibration, evaluating the effective resolution directly on biological samples is more practical. This is typically performed via linewidth analysis of known structures (e.g., microtubules) or edge-spread function measurements, capturing the effects of photobleaching and sample-induced aberrations. A major paradigm shift is parameter-free resolution estimation based on decorrelation analysis. This method analyzes the autocorrelation decay of a single image’s Fourier spectrum to identify the cutoff spatial frequency without requiring dual datasets or user-defined thresholds. Its high efficiency and broad applicability have been validated across widefield, confocal, STED, SIM, and SMLM modalities. Optimized rendering strategies for SMLM data further enhance its accuracy, and it is emerging as a tool for real-time optimization of experimental parameters. The review also addresses the “gold standard” of resolution validation using well-defined nanostructures, such as DNA origami and nuclear pore complexes, which provide ground truth for verifying resolution claims and detecting artifacts. In the era of artificial intelligence, deep learning plays a dual role: it powerfully enhances image resolution but also introduces challenges, as models may generate “hallucinations” or false details. This underscores the need for new validation metrics to verify the physical fidelity of AI-generated content. Finally, we outline future directions: developing unified cross-modality standards, enabling real-time dynamic resolution monitoring for live-cell imaging, creating techniques for generating local resolution maps to capture sample heterogeneity, and integrating intelligent error correction to ensure data veracity. By providing a comprehensive overview of resolution assessment progress and challenges, this review aims to equip researchers with the knowledge to select appropriate tools, thereby fostering rigorous quantitative imaging in the life and material sciences.
方三华,陈静瑶,杨丹,刘丽.超分辨光学显微成像中的分辨率检测:适配方法与前沿进展[J].生物化学与生物物理进展,2026,53(4):805-825
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