1.广东医科大学;2.深圳市第三人民医院
国家重点研发计划(2023YFA0915600),深圳市医学研究专项(D250402006),国家自然科学基金(82372271),广东省高校重点领域项目(2022DZX2022),广东省医学科研基金(A2024400),深圳市科技计划(JCYJ20240813102021028、JCYJ20240813102012017、JCYJ20250604143832042)。
1.Guangdong Medical University;2.The Third People'3.'4.s Hospital of Shenzhen
National Key R&D Program of China (2023YFA0915600), Shenzhen Medical Research Fund (D250402006), Natural Science Foundation of China (82372271), Key Area Projects for Universities in Guangdong Province (2022DZX2022), Guangdong Province Medical Science and Technology Research Fund (A2024400), Shenzhen Science and Technology Program (JCYJ20240813102021028, JCYJ20240813102012017, JCYJ20250604143832042).
由多重耐药(MDR)细菌引发的感染已成为全球公共卫生的重大挑战。传统抗生素药物研发乏力、疗效下降,亟需开发新型抗菌策略。噬菌体作为天然杀菌剂,具有特异性强、可自我复制及生产成本低等显著优势。然而,野生型噬菌体在临床应用中仍面临宿主谱呈现高度多样性、易被免疫系统清除、难以穿透生物膜等瓶颈。随着合成生物学、纳米技术与基因编辑技术的融合发展,工程噬菌体技术取得长足进步,为突破上述局限提供了可编程、可扩展且具临床转化潜力的技术路径。本文系统综述了工程噬菌体的化学修饰、体内编辑、体外合成及定向进化等核心构建策略,重点介绍了其在破坏细菌生物膜、削弱病原菌毒力、恢复抗生素敏感性、递送纳米药物及调控微生态平衡等方面的治疗应用与作用机制,深入分析了其在宿主匹配、细菌耐受、药代动力学、给药途径、生产质控及临床剂量确定等方面面临的挑战,并展望了多学科交叉背景下工程噬菌体的智能化设计、标准化制备及临床转化前景,旨在为多重耐药菌感染的新型生物疗法提供理论参考与技术支撑。
Multidrug-resistant (MDR) bacterial infections have emerged as a serious challenge of global public health crisis. The overuse and misuse of conventional antibiotics have dramatically accelerated the emergence, evolution and worldwide spread of drug-resistant bacterial strains, necessitating urgent exploration of novel antibacterial strategies. Bacteriophages serve as natural bacterial predators offering distinct advantages including high host specificity, autonomous self-replication capabilities and cost-effective large-scale production. However, wild-type phages present significant clinical limitations due to their narrow host ranges, susceptibility to rapid immune clearance and poor penetration of bacterial biofilms, which severely restrict their therapeutic applications. The convergence of synthetic biology, nanotechnology and advanced gene editing technologies has accelerated the development of engineered bacteriophage platforms, providing programmable, scalable and clinically translatable pathways to overcome these inherent biological constraints. Here, we systematically delineate four fundamental strategies for engineered bacteriophage development. Chemical modification utilizes reactive functional groups such as amino, carboxyl and thiol moieties on capsid proteins through esterification, amidation or click chemistry reactions to achieve precise drug conjugation and surface functionalization. In vivo editing encompasses ultraviolet or chemical mutagenesis for random mutation induction, homologous recombination for targeted genetic alterations, recombineering methodologies including electroporation-mediated bacteriophage recombination engineering, and CRISPR-Cas systems for precise genome editing to enable exact genetic reconstruction and host range reprogramming. In vitro synthesis leverages genome engineering platforms where intact phage genomes are transferred into yeast or host bacteria to facilitate highly efficient homologous recombination, enabling large DNA fragment assembly and cross-gene host range expansion without bacterial toxicity constraints. Directed evolution combines artificial selection through mutation library screening with rational design approaches involving chimeric receptor binding protein construction or site-specific mutagenesis, effectively balancing the discovery of unknown adaptive pathways with targeted host specificity modification. Moreover, we comprehensively discuss therapeutic applications across diverse clinical scenarios. Engineered bacteriophage effectively disrupt bacterial biofilms through sophisticated functionalized delivery platforms including nanozyme-conjugated phages, phage-liposome nanoconjugates and bio-responsive hydrogels, demonstrating significantly enhanced bactericidal efficiency compared to unmodified free phages. These bioengineered vectors attenuate bacterial virulence and resensitize pathogens to antibiotics by delivering CRISPR-Cas systems or base editors to disrupt critical virulence factors such as pili, capsule synthesis machineries and quorum sensing systems, or by inactivating antibiotic resistance determinants including beta-lactamase genes. As intelligent nanomedicine delivery platform, engineered bacteriophage enable precise pathogen elimination through photocatalytic reactive oxygen species generation, immunomodulatory interventions, or controlled release of antibacterial drugs. Furthermore, oral administration of engineered bacteriophage facilitates microbiota modulation, which selectively eliminate intestinal pathogens while preserve beneficial commensal microbiota, thereby restoring microbial community balance and preventing complications associated with dysbiosis. Finally, we critically analyze persistent challenges including host strain matching complexity, evolution of bacterial resistance mechanisms, pharmacokinetic optimization requirements, optimal administration route selection, large-scale production quality control standards and clinical dosing determination protocols. Through multidisciplinary integration of synthetic biology, infectious disease medicine and immunology, future translational medicine studies of bacteriophage should establish comprehensive technical platforms encompassing rapid phage screening, intelligent rational design, rigorous in vivo evaluation and standardized clinical validation processes, ultimately advancing engineered bacteriophage from laboratory innovations to clinically approved therapeutics for effectively combating MDR bacterial infections.
陈玉颖,黄春梅,潘金枝,刘德亮,周泱,戴桂琴,赵鹏飞,卢洪洲,郑明彬.工程噬菌体治疗多重耐药细菌感染[J].生物化学与生物物理进展,,():
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