利用p53 C端118个氨基酸的mRNA二级结构和Chou-Fasman蛋白质二级结构预测原则,预测p53蛋白质C端289~325为卷曲肽段,368~393段包括两段螺旋结构: α1 368~373, α2 381~388.其中三段已知的蛋白质二级结构与此mRNA二级结构单元间有准确的对应关系.与四种以多重序列联配为基础的蛋白质二级结构预测方法(准确率均为73.20%左右)相对照,预测结果基本一致.结合单体聚合区31个氨基酸晶体结构,在SGI INDIGO2工作站上构建了p53 C端108个残基的三维结构.进一步揭示了p53 C端诸多生物功能区之间的空间构象关系.
It was expected that there are a coil (289~325) and two α helix (α1 368~373,α2 381~388) structures in p53 protein C-terminal region based on its mRNA secondary structure template and Chou-Fasman's protein secondary structure principle of prediction. The result was conformed by the other four methods of protein secondary structure prediction that are based on the multiple sequence alignment (accuracy=73.20%). Combine with the 31 amino acids crystal structure of the oligomerization, the three dimensional conformation of p53 C-terminal 108 residues was built using the SGI INDIGO2 computer. This structure further expounds the relationship among those biological function domains of p53 C-terminus at three-dimensional level.
张彦,刘次全. p53蛋白质C端的三维结构及生物功能区[J].生物化学与生物物理进展,1999,26(3):265-270
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