基因组印记中的长非编码RNA
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河北农业大学生命科学学院,河北农业大学生命科学学院,河北农业大学生命科学学院,河北科技大学生物科学与工程学院,河北农业大学生命科学学院

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国家自然科学基金资助项目(31372312)


The Function of Long Non-coding RNAs in Genomic Imprinting
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College of Life Science,Agricultural University of Hebei,College of Life Science,Agricultural University of Hebei,College of Life Science,Agricultural University of Hebei,Hebei University of Science and Technology,College of Life Science,Agricultural University of Hebei

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This work was supported by a grant from The National Natural Science Foundation of China(31372312)

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    摘要:

    长非编码RNA(lncRNA)是长度大于200 bp的一类非编码蛋白的RNA,因其在基因组中含量巨大以及重要的生物学功能引起了学术界的广泛关注.基因组印记是一种表观遗传现象,lncRNAs通过建立靶基因的印记而发挥重要的生物功能.基因组印记可以用来研究lncRNAs在转录和转录后水平调控基因表达的分子机制.本文选取6个印记机制研究比较透彻的印记区域,包括Kcnq1/Cdkn1c、Igf2r/Airn、Prader-Willi (PWS)/Angelman (AS)、Snurf/Snrpn、Dlk1-Dio3H19/Igf2.通过介绍包括基因间lncRNAs(H19、Ipw Meg3)、反义lncRNAs (Kcnq1ot1、Airn、Ube3a-ATS)和增强子lncRNAs (IG-DMR eRNAs)在内的3种类型lncRNAs在印记调控中的作用,从而了解lncRNAs通过顺式或(/和)反式作用多种机制调控亲本特异性靶基因的表达.了解印记基因簇中lncRNAs的作用方式将有助于我们揭示lncRNAs在整个基因组中的作用机制.

    Abstract:

    Long noncoding RNAs (lncRNA) are non-protein coding transcripts longer than 200 nucleotides. The field of long noncoding RNA (lncRNA) research has been rapidly advancing in recent years as its large number and important biological functions. Genomic imprinting is an epigenetic phenomenon. The lncRNAs play a critical role in important biological functions by establishing genomic imprinting of target genes. Genomic imprinting has been a great resource for studying transcriptional and post-transcriptional-based gene regulation by lncRNAs. This review will focus on the mechanisms of imprinting in six of the most well-studied imprinted gene clusters: Kcnq1/Cdkn1c, Igf2r/Airn, Prader-Willi (PWS)/Angelman (AS), Snurf/Snrpn, Dlk1-Dio3, H19/Igf2, and overview the functional role of antisense lncRNAs (Kcnq1ot1t1, Airn and Ube3a-ATS), intergenic lncRNAs (H19, IPW and MEG3), and enhancer lncRNAs (IG-DMR eRNAs) to understand the diverse mechanisms being employed by them in cis and (/or) trans to regulate the parent-of-origin-specific expression of target genes. A better understanding of these downstream mechanisms will help to improve our general understanding of the function of ncRNAs throughout the genome.

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杨文志,张萃,王冠楠,李冬杰,李世杰.基因组印记中的长非编码RNA[J].生物化学与生物物理进展,2016,43(5):461-471

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历史
  • 收稿日期:2015-12-20
  • 最后修改日期:2016-03-10
  • 接受日期:2016-03-15
  • 在线发布日期: 2016-05-20
  • 出版日期: 2016-05-20