Review: Study on Aptamers Targeting Tumor-associated Carbohydrate Antigens
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College of Basic Medical Sciences, Zhengzhou University, Zhengzhou 450001, China

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This work was supported by a grant from Qiushi Scientific Research Program of Zhengzhou University (32213131).

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    Abstract:

    Abnormal glycosylation of tumor cells is a sign of cancer, and it plays a vital role in malignant transformation and cancer progression. Tumor-associated carbohydrate antigens (TACAs) caused by different mechanisms have been suggested as biomarkers for clinical oncology diagnosis, as well as specific targets for therapeutic interventions. For both aspects, the development of TACA-specific binders with high affinity and specificity is of essential significance. Lectins and antibodies are the major biological tools for the recognition of specific glycans. However, due to the complex structural homology and low immunogenicity of glycans, the recognition capability of lectins and preparation of sugar-specific antibodies are facing distinct challenges. Aptamers, which are short single-stranded DNA/RNA oligonucleotides capable of recognizing a range of chemical and biological species, seem to be a potential solution. They exhibit several significant advantages, such as smaller size, better stability, easier synthesis, facile modification, lower toxicity, and immunogenicity, for in vivo utilization. In recent years, aptamers have attracted increasing attention in the recognition of carbohydrates, but review literatures on aptamers targeting glycans are lag behind. This review focuses on the current development of TACA-binding aptamers. Firstly, we present a brief overview of the role of glycosylation changes in cancer growth, and cite some frequent TACAs as recognized hallmark traits. Secondly, we discuss the major challenges that hinder the exploration of glycan recognition receptors, and compare the strengths and weaknesses of lectins and antibodies. Thirdly, we underline the unique advantages of aptamers, and summarize the available or improved TACA-binding aptamers. According to the target sources in the aptamer screening procedure, 3 kinds of targets including purified carbohydrate molecules, glycan epitope of proteins, and serum carbohydrate antigens are described. We highlight specific examples to emphasize the progress in terms of screening methods, aptamer performance and applicabilities. Finally, we conclude the main contents, and provide the suggestions and directions for developing more valuable, effective, and high-performance TACA-targeted aptamers in the future. In contrast with lectins and antibodies, aptamers are still a newly emerging force, and the aptamer-based scientific research and translational applications have experienced rapid expansion recently. It is worth noting that only a few aptamers with sufficient affinity, specificity, and stability could be used for practical applications, and the number of aptamers available for glycan recognition is even more limited. Until now, most aptamers against glycoprotein biomarkers have been obtained without directing the selection towards any specific region of the target. Consequently, in most cases it is not known whether glycan, peptide or both are involved in the binding. It has still remained a great challenge to screen glycan-specific aptamers, and more efforts are needed to elevate the application of aptamers in cancer diagnosis and treatment to a new level. With the continuous advancement of aptamer screening technology, we believe that more new types of TACA aptamers will be generated, and their specificities will be further improved. Therefore, nucleic acid aptamers hold great prospect and strong market in the future clinical practice, and the detection of glycoforms of current biomarkers is a promising approach to improve sensitivity and specificity in early cancer diagnosis.

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LI Wei, CHEN Jing, ZHANG Xu, YUAN Bao-Yin, ZANG Ming-Xi.Review: Study on Aptamers Targeting Tumor-associated Carbohydrate Antigens[J]. Progress in Biochemistry and Biophysics,2023,50(9):2131-2145

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History
  • Received:July 19,2023
  • Revised:August 24,2023
  • Accepted:August 17,2023
  • Online: September 21,2023
  • Published: September 20,2023