综述: 大肠杆菌RNA分子伴侣Hfq与DsrA和rpoS作用机制的研究进展
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中国科学技术大学合肥微尺度物质科学国家实验室筹、生命科学学院,中国科学技术大学合肥微尺度物质科学国家实验室筹、生命科学学院,中国科学技术大学合肥微尺度物质科学国家实验室筹、生命科学学院,中国科学技术大学合肥微尺度物质科学国家实验室筹、生命科学学院,中国科学技术大学合肥微尺度物质科学国家实验室筹、生命科学学院

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国家重点基础研究发展计划(973)(2011CB966302, 2011CB911104),自然科学基金面上项目(31270782)和中国科学院“引进杰出技术人才”计划资助项目


Review: Research Progress of Escherichia coli RNA Chaperone Hfq Interaction With DsrA and rpoS
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University of Science and Technology of China,University of Science and Technology of China,University of Science and Technology of China,University of Science and Technology of China,University of Science and Technology of China

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This work was supported by grants from National Basic Research Program of China (2011CB966302, 2011CB911104), The National Natural Science Foundation of China (31270782) and The "Outstanding Technical Talent" Project of Chinese Academy of Sciences

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    摘要:

    RNA分子伴侣Hfq是细菌重要的转录后调节因子,它能够帮助非编码small RNA(sRNA)与目标mRNA配对.mRNA rpoS编码的稳态sigma因子σS是大肠杆菌中应激响应的核心调控因子.在低温下,Hfq蛋白对于sRNA DsrA介导的mRNA rpoS的翻译激活是必需的.然而,Hfq使用何种机制来促进sRNA和mRNA配对一直有两种并不互斥的模型存在:Hfq远侧和近侧两个表面同时结合sRNA和mRNA,使得两条RNA相互靠近,便于形成碱基配对;Hfq可能结合一条或者两条RNA,改变它们的二级结构或者三级结构,从而促进sRNA-mRNA配对的实现.最近的研究报道,成功在体外捕捉到了sRNA-Hfq-mRNA三元复合物,测定了AU6A-Hfq-A7三元复合物的晶体结构,并且在大肠杆菌体内证实了三元复合物的形成对于Hfq帮助sRNA DsrA激活mRNA rpoS的翻译是重要的.本文以sRNA DsrA和mRNA rpoS为例综述了蛋白质Hfq与RNA的结合特性,同时也讨论了sRNA-Hfq-mRNA三元复合物的存在对于研究sRNA介导的调控机制的一些启示.

    Abstract:

    Hfq is a bacterial post-transcriptional regulator. It facilitates base-pairing between sRNA and target mRNA. The mRNA rpoS, which encodes the master regulator σS of general stress response, requires Hfq-facilitated base pairing with DsrA small RNA for efficient translation at low temperatures. Two mutually non-exclusive mechanisms have been proposed to explain the process of how Hfq facilitates base pairing of sRNA DsrA to mRNA rpoS: Hfq may form ternary complex with two RNAs via co-binding to bring the RNA strands into close proximity for optimal annealing; Hfq may bind one or both RNAs, and change its (or their) secondary (or tertiary) structure to facilitate the RNA pairing. Recently, several complex crystal structures of AU6A-Hfq-ATP, A7-Hfq, and AU6A-Hfq-A7 were acquired, and interesting structural features were extracted from them to deepen our understanding in the RNA binding properties of Hfq and its RNA complexes. Furthermore, the formation of ternary complex sRNA-Hfq-mRNA is proved to be necessary for translation activation of rpoS mRNA in vivo. This mini-review summarizes some recent structural biology advances in the research of DsrA-regulated translation of rpoS and the biological implications of the transient ternary complex are discussed.

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王丽君,王维维,龚庆国,吴季辉,施蕴渝.综述: 大肠杆菌RNA分子伴侣Hfq与DsrA和rpoS作用机制的研究进展[J].生物化学与生物物理进展,2013,40(7):627-633

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历史
  • 收稿日期:2013-06-19
  • 最后修改日期:2013-06-19
  • 接受日期:2013-07-03
  • 在线发布日期: 2013-07-24
  • 出版日期: 2013-07-20