河北大学,河北大学,河北大学,中国科学院动物研究所,中国科学院基因组研究所,中国科学院生物物理研究所,Centre for Biodiversity and Conservation Biology, Royal Ontario Museum,,中国科学院动物研究所,中国科学院动物研究所
国家重点基础研究发展计划(2011CB504605)和国家自然科学基金(31090253, 31210103912)资助项目
Hebei University,Hebei University,Hebei University,Institute of Zoology, Chinese Academy of Sciences,,Institute of Genome, Chinese Academy of Sciences,Institute of Biophysics, Chinese Academy of Sciences,Centre for Biodiversity and Conservation Biology, Royal Ontario Museum,,Institute of Zoology, Chinese Academy of Sciences,Institute of Zoology, Chinese Academy of Sciences
This work was supported by grants from The National Basic Research Program of China (2011CB504605) and The National Natural Science Foundation of China (31090253, 31210103912)
榕小蜂的雌雄个体之间存在很大表型差异,以至于很难将雌雄个体彼此联系在一起.以对叶榕传粉榕小蜂作为材料,利用“加权基因共表达网络分析”软件(WGCNA),对榕小蜂的基因组和转录组进行分析,结果发现,5个基因共表达模块,分别用蓝色、蓝绿色、棕色、绿色和黄色标识,其中2个模块偏爱在雌蜂中表达,3个模块偏爱在蛹中表达.基因本体(GO)分析发现在蓝绿色和黄色表达模块中发现3个功能富集的基因集合.在蓝绿色基因表达模块中发现2个基因集合,分别与细胞周期和核苷酸结合活性有关;在黄色基因表达模块中发现1个基因结合,与细胞分化有关,尤其是与神经发育有关.
Female fig wasps differ phenotypically from conspecific males to the extent that often they cannot be associated with one another. Weighted gene co-expression network analysis (WGCNA) of the genome and transcriptomes of one such fig wasp, Ceratosolensolmsi, generated five expression modules, which were flagged as blue, turquoise, brown, green and yellow. These involved two female-biased expression modules and three pupa-biased expression modules, respectively. Gene ontologies indicated three functional enrichment gene sets in modules turquoise and yellow. Two functional enrichment gene sets that participate in cell cycle or have nucleotide binding activityclustered in turquoise module. The functionally enriched gene set in yellow module played roles in cell differentiation, especially in neuron morphogenesis.
崔东亚,孙旭斌,王佳佳,张鹏,孙宝发,陈小伟,Robert W. Murphy,何顺民,黄大卫.榕小蜂基因共表达研究[J].生物化学与生物物理进展,2016,43(1):83-89
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